hydroxychloroquine

hospitalization

Data

Meta-analysis

                                                               OR
BCN PEP-CoV-2-Study 2 (Mitja et al. Clin Infect Dis), 2020 0.7500
Szente, 2020                                               0.4500
COPE – Coalition V, 2022                                   0.7700
BCN PEP-CoV-2-Study 2 (Mitja Lancet-preprint), 2020        0.8358
PATCH Cohort 1 (Amaravadi), 2021                           2.7931
                                                                      95%-CI
BCN PEP-CoV-2-Study 2 (Mitja et al. Clin Infect Dis), 2020 [0.3189;  1.7639]
Szente, 2020                                               [0.2516;  0.8050]
COPE – Coalition V, 2022                                   [0.5247;  1.1300]
BCN PEP-CoV-2-Study 2 (Mitja Lancet-preprint), 2020        [0.3266;  2.1390]
PATCH Cohort 1 (Amaravadi), 2021                           [0.1045; 74.6253]
                                                           %W(fixed) %W(random)
BCN PEP-CoV-2-Study 2 (Mitja et al. Clin Infect Dis), 2020      11.1       11.1
Szente, 2020                                                    24.0       24.0
COPE – Coalition V, 2022                                        55.0       55.0
BCN PEP-CoV-2-Study 2 (Mitja Lancet-preprint), 2020              9.2        9.2
PATCH Cohort 1 (Amaravadi), 2021                                 0.8        0.8

Number of studies combined: k = 5

                         OR           95%-CI     z p-value
Fixed effect model   0.6868 [0.5167; 0.9129] -2.59  0.0097
Random effects model 0.6868 [0.5167; 0.9129] -2.59  0.0097

Quantifying heterogeneity:
 tau^2 = 0 [0.0000; 1.3947]; tau = 0 [0.0000; 1.1810];
 I^2 = 0.0% [0.0%; 74.6%]; H = 1.00 [1.00; 1.99]

Test of heterogeneity:
    Q d.f. p-value
 3.28    4  0.5120

Details on meta-analytical method:
- Inverse variance method
- DerSimonian-Laird estimator for tau^2
- Jackson method for confidence interval of tau^2 and tau

Forest plot - standard presentation

Forest plot - advanced presentation

Sensitivity analysis

                                   method        TE        ll        ul
1                     DerSimonian & Laird 0.6867811 0.5166647 0.9129098
2  DerSimonian & Laird, Hartung and Knapp 0.6867811 0.4766983 0.9894481
3                                      PM 0.6867811 0.5166647 0.9129098
4                   PM, Hartung and Knapp 0.6867811 0.4766983 0.9894481
5                                    REML 0.6840940 0.5049437 0.9268053
6                                      ML 0.6867811 0.5166647 0.9129098
7                                      HS 0.6867811 0.5166647 0.9129098
8                                      SJ 0.6855313 0.4381733 1.0725281
9                                      HE 0.6867811 0.5166647 0.9129098
10                                     EB 0.6867811 0.5166647 0.9129098
          pval k
1  0.009669684 5
2  0.046063789 5
3  0.009669684 5
4  0.046063789 5
5  0.014261907 5
6  0.009669684 5
7  0.009669684 5
8  0.098259518 5
9  0.009669684 5
10 0.009669684 5

publication bias

                                                                OR
BCN PEP-CoV-2-Study 2 (Mitja et al. Clin Infect Dis), 2020  0.7500
Szente, 2020                                                0.4500
COPE – Coalition V, 2022                                    0.7700
BCN PEP-CoV-2-Study 2 (Mitja Lancet-preprint), 2020         0.8358
PATCH Cohort 1 (Amaravadi), 2021                            2.7931
Filled: BCN PEP-CoV-2-Study 2 (Mitja Lancet-preprint), 2020 0.5297
Filled: PATCH Cohort 1 (Amaravadi), 2021                    0.1585
                                                                       95%-CI
BCN PEP-CoV-2-Study 2 (Mitja et al. Clin Infect Dis), 2020  [0.3189;  1.7639]
Szente, 2020                                                [0.2516;  0.8050]
COPE – Coalition V, 2022                                    [0.5247;  1.1300]
BCN PEP-CoV-2-Study 2 (Mitja Lancet-preprint), 2020         [0.3266;  2.1390]
PATCH Cohort 1 (Amaravadi), 2021                            [0.1045; 74.6253]
Filled: BCN PEP-CoV-2-Study 2 (Mitja Lancet-preprint), 2020 [0.2070;  1.3555]
Filled: PATCH Cohort 1 (Amaravadi), 2021                    [0.0059;  4.2347]
                                                            %W(random)
BCN PEP-CoV-2-Study 2 (Mitja et al. Clin Infect Dis), 2020        10.1
Szente, 2020                                                      21.8
COPE – Coalition V, 2022                                          50.1
BCN PEP-CoV-2-Study 2 (Mitja Lancet-preprint), 2020                8.3
PATCH Cohort 1 (Amaravadi), 2021                                   0.7
Filled: BCN PEP-CoV-2-Study 2 (Mitja Lancet-preprint), 2020        8.3
Filled: PATCH Cohort 1 (Amaravadi), 2021                           0.7

Number of studies combined: k = 7 (with 2 added studies)

                         OR           95%-CI     z p-value
Random effects model 0.6654 [0.5072; 0.8729] -2.94  0.0033

Quantifying heterogeneity:
 tau^2 = 0 [0.0000; 0.9070]; tau = 0 [0.0000; 0.9523];
 I^2 = 0.0% [0.0%; 59.1%]; H = 1.00 [1.00; 1.56]

Test of heterogeneity:
    Q d.f. p-value
 4.29    6  0.6379

Details on meta-analytical method:
- Inverse variance method
- DerSimonian-Laird estimator for tau^2
- Jackson method for confidence interval of tau^2 and tau
- Trim-and-fill method to adjust for funnel plot asymmetry

p-values plot

Reference: https://f1000research.com/slides/7-1913

E-value

script: metaEvidence1.rmd (rfile)